JCM Catalogue

Pediococcus acidilactici Lindner 1887
Taxonomy in NCBI database: Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae.
8797T <-- NRIC 0115 <-- DSM 20284 <-- W. Back B213c.
Accessioned in 1993.
=CCUG 32235 =CGMCC 1.2696 =CIP 103408 =DSM 20284 =KCTC 3771 =LMG 11348 =NBRC 109619 =NCFB 2767 =NCIMB 12174 =NRIC 0115.
Type strain [3535].
Medium: 1, 68, 84;  Temperature: 30°C; Rehydration fluid: 663.   more information +  Full / Short version of the cataloguepage top

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Biochemistry/Physiology: [3535].
DNA-DNA relatedness: [3535].
Phylogeny: 16S rRNA gene (AJ305320, LC097074).
Taxonomy: Neotype strain [3535].
Genome sequence: BMWN00000000, JAAXPQ000000000.
NCBI Assembly ID: GCA_014651255 (GenBank), GCF_014651255 (RefSeq).
BacDive ID: 6381.
NCBI Taxonomy ID: 1254.
Publication(s) using this strain [A05166, A06010, A07209, A08254, A08260, A09005, B09027, A12417, A17126].
Patent publication(s) using this strain [JP2007-037503A, JP2007-070305A, WO2007/139055, JP2010-029130A, WO2011/111734, WO2012/043622, WO2012/124639, WO2018/207888, 2019-201590, WO2020/032166].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
2014 <-- C. Kaneuchi <-- K. Komagata <-- S. Tanasupawat Ph-58.
Accessioned in 1983.
Tetragenococcus halophilus.
Pediococcus halophilus.
Medium: 509;  Temperature: 30°C; Rehydration fluid: 663.   more information +
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Source: Kung-chom (fermented shrimps) [1217].
Biochemistry/Physiology: [1217].
Phylogeny: 16S rRNA gene (LC260021).
More information: Cataloged as Tetragenococcus halophilus until Mar. 2016.
BacDive ID: 162780.
Publication(s) using this strain [A08183].
Patent publication(s) using this strain [JP2010-124720A].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
2032 <-- C. Kaneuchi <-- K. Komagata <-- S. Tanasupawat N-53.
Accessioned in 1983.
=TISTR 424.
Medium: 1, 68;  Temperature: 30°C; Rehydration fluid: 663.   more information +
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Source: Nham (fermented pork) [1217].
Biochemistry/Physiology: [1217].
Fatty acid: [2462].
G+C (mol%): 42.8 [2462].
Phylogeny: 16S rRNA gene (LC269265).
BacDive ID: 162874.
Patent publication(s) using this strain [WO2008/102745, JP2010-124720A, WO2011/111734].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
15055 <-- K. Doi NGRI 0510Q.
Accessioned in 2007.
=BCRC 80335 =DSM 19927.
Pediococcus lolii.
Medium: 1;  Temperature: 30°C; Anaerobic; Rehydration fluid: 663.   more information +
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Source: Ryegrass silage [7690].
Cell wall: [7690].
G+C (mol%): 41 (HPLC) [7690].
DNA-DNA relatedness: [7690,9239].
Phylogeny: 16S rRNA gene (AB362985, LC311071) [7690], pheS (HE962540) [9239].
DNA typing: RAPD, ERIC-PCR [7690], FAFLP [9239].
Other taxonomic data: MALDI-TOF MS [9239].
Taxonomy: [9239].
More information: Type strain of Pediococcus lolli [7690].
BacDive ID: 6379.
NCBI Taxonomy ID: 1254.
Publication(s) using this strain [B09027, A12238].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
20119 <-- IAM 1233 <-- ATU L-12 <-- ATCC 8042 <-- R. P. Tittsler ("Pediococcus cerevisiae") <-- E. E. Snell P-60 (Leuconostoc mesenteroides).
Accessioned in 2007.
=ATCC 8042 =ATU L-12 =CCM 2425 =DSM 20238 =IAM 1233 =IFO 3076 =NBRC 3076 =NCDO 521 =NCIMB 6990 =NCIMB 7881 =NCIMB 8018 =NCIMB 8031 =NCTC 6990 =NISL 7202.
Medium: 1, 68, 84;  Temperature: 30°C; Rehydration fluid: 663.   more information +
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Description: [6682].
Biochemistry/Physiology: [2196].
Cell wall: [010].
Fatty acid: [6649].
G+C (mol%): 38.0 [6728].
DNA-DNA relatedness: [2195].
Phylogeny: 16S rRNA gene (LC311073).
Other taxonomic data: Amino acid requirements [6687]; Vitamin requirements [6688]; Effects of carbohydrates [6689]; Lipids [6691].
Taxonomy: [6650,6682].
Genome sequence: CP033438.
Assay: Panthenol [6693], amino acids [6692], pantothenic acid [6735], pyridoxal (vitamin B6 requirement) [6733].
NCBI Assembly ID: GCA_004355265 (GenBank), GCF_004355265 (RefSeq).
BacDive ID: 6380.
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
20303 <-- IAM 10061 <-- K. Kitahara ("Pediococcus lindneri").
Accessioned in 2007.
=IAM 10061.
Medium: 1, 68, 84;  Temperature: 30°C; Rehydration fluid: 663.   more information +
Source: Sake mash [6695].
Description: [367,6695,6696].
Morphology: [126].
Biochemistry/Physiology: [126].
Fatty acid: [6649].
G+C (mol%): 43.9, 44.1 [126].
DNA-DNA relatedness: [2195].
Taxonomy: [126,367,6650,6682,6711,6712,6713,6714].
BacDive ID: 162858.
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
This product was produced by the IAM Culture Collection (IAM) and transferred to JCM in 2007. Viability and purity assays were performed by IAM at the time of production. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
20445 <-- IAM 12283 <-- K. Sakaguchi <-- A. Nakagawa and K. Kitahara S-20.
Accessioned in 2007.
=IAM 12283 =IFO 3888 =NBRC 3888 =NCDO 1861 =NISL 7140.
Medium: 1, 68, 84;  Temperature: 30°C; Rehydration fluid: 663.   more information +
Source: Sake mash [6682].
Biochemistry/Physiology: [6650,6682].
Fatty acid: [6649].
BacDive ID: 162927.
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
This product was produced by the IAM Culture Collection (IAM) and transferred to JCM in 2007. Viability and purity assays were performed by IAM at the time of production. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
20451 <-- IAM 12292 <-- K. Sakaguchi <-- H. R. White S-344 (Pediococcus parvulus).
Accessioned in 2007.
=IAM 12292.
Pediococcus pentosaceus.
Medium: 1, 68;  Temperature: 30°C; Rehydration fluid: 663.   more information +
Source: Silage [2196].
Biochemistry/Physiology: [2196,6650].
DNA-DNA relatedness: [2195].
More information: Cataloged as Pediococcus pentosaceus until May 2016.
BacDive ID: 162931.
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
This product was produced by the IAM Culture Collection (IAM) and transferred to JCM in 2007. Viability and purity assays were performed by IAM at the time of production. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
20454 <-- IAM 12295 <-- K. Sakaguchi <-- A. Nakagawa and K. Kitahara <-- C. S. Pederson E-66 ("Pediococcus cerevisiae").
Accessioned in 2007.
=IAM 12295 =NCDO 991.
Pediococcus pentosaceus.
Medium: 1, 68;  Temperature: 30°C; Rehydration fluid: 663.   more information +
Source: Fermenting vegetable [6682].
Biochemistry/Physiology: [2196,6650,6682].
DNA-DNA relatedness: [2195].
More information: Cataloged as Pediococcus pentosaceus until May 2016.
BacDive ID: 162934.
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
This product was produced by the IAM Culture Collection (IAM) and transferred to JCM in 2007. Viability and purity assays were performed by IAM at the time of production. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
20456 <-- IAM 12297 <-- K. Sakaguchi <-- A. Nakagawa and K. Kitahara <-- C. S. Pederson K-64 ("Pediococcus cerevisiae").
Accessioned in 2007.
=IAM 12297 =NISL 7114.
Pediococcus pentosaceus.
Medium: 1, 68;  Temperature: 30°C; Rehydration fluid: 663.   more information +
Source: Fermenting vegetable [6682].
Biochemistry/Physiology: [2196,6650,6682].
Fatty acid: [6649].
More information: Cataloged as Pediococcus pentosaceus until May 2016.
BacDive ID: 162935.
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
This product was produced by the IAM Culture Collection (IAM) and transferred to JCM in 2007. Viability and purity assays were performed by IAM at the time of production. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
20463 <-- IAM 12304 <-- K. Sakaguchi <-- NCTC.
Accessioned in 2007.
=IAM 12304.
Aerococcus viridans.
Medium: 1, 13;  Temperature: 30°C; Rehydration fluid: 663.   more information +
More information: Cataloged as Aerococcus viridans until May 2016.
BacDive ID: 162941.
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
This product was produced by the IAM Culture Collection (IAM) and transferred to JCM in 2007. Viability and purity assays were performed by IAM at the time of production. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
5885 <-- ATCC 33314 <-- NCDO 1859 <-- IFO 3884 <-- K. Kitahara.
Accessioned in 1986.
=ATCC 33314 =BCRC 14053 =CGMCC 1.2441 =DSM 20333 =IFO 3884 =KCTC 3116 =LMG 11385 =NBRC 3884 =NCDO 1859 =NCIMB 12009 =VKM B-2206 =VTT E-88312.
Pediococcus acidilactici.
Medium: 83, 84;  Temperature: 37°C; Rehydration fluid: 663.   more information +
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Source: Sake mash.
Biochemistry/Physiology: [3535].
Cell wall: [639].
Fatty acid: [2462].
G+C (mol%): 39.2 [639], 37.8 [2462].
DNA-DNA relatedness: [2195,2229,3535].
Phylogeny: 16S rRNA gene (AF404733, LC096205).
Taxonomy: [3535].
More information: Formerly designated as the type strain of Pediococcus acidilactici [596,3535].
BacDive ID: 6392.
Publication(s) using this strain [A04035, A04080, A04160, A04218, A05166, A05224, A05232, A06010, A06014, A07007, A07209, A08166, A08220, A08254, A09005, A09184, A09270, A10252, A11021, A11312, A11328, A12037, A12045, A12058, A12067, A12092, A12094, A12380, A12417, A13012, A13446, A15086, A15575, A15609, A18089, A22162, A22391].
Patent publication(s) using this strain [JP2008-263971A, JP2009-195251A, JP2010-081935A, JP2010-029130A, JP2010-124720A, JP2011-000045A, JP2012-67034A, WO2012/091081 , 2016-073314, 2017-201984].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
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